Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874606.1_cds_XP_016435546.1_31497
CDS Infomation

[gene=LOC107761784] [db_xref=GeneID:107761784] [protein=B3 domain-containing transcription repressor VAL2-like isoform X2] [protein_id=XP_016435546.1] [location=join(2533..2645,3851..3932,4030..4131,4644..5284,5367..5463,5654..5828,6528..6604,6685..7107,7245..7294,7698..7811,7899..7966,8210..8689,8773..8834)] [gbkey=CDS]
Sequence

ATGGATTCTAAGATTTGCATGAATGGAGTATGTGGGGCTACTTCTTCAATTGAGTGGAAA
AAAGGCTGGCCTTTAAAATCTGGTGAATTTGCCTGCCTCTGTGATAAATGCGGGACTGCT
TATGAGCAACTCGTCTTCTGTGATTTATTCCACTCGGAGGACACTGGTTGGAGGGAGTGT
ATTTCATGTGGCAAGCGTCTTCATTGCGGATGCATTGCTTCTAGTTCTTTGCTGGAGCTG
CTTGATAGTGGGGGCATTAATTGTGTCAGCTGTGCTAGAAGTTGTCAACTACATGCTACA
CCAAATCATGTAAAGGCCAAAGCTTTTGGAACTTCTAACTCAAACAGTGTTGGTGAAACG
CCTTCAACTTCTTTGGGCAGTCAGATGAATGGTTCTGAACCTAATAAAAGAGAGGGTTCT
GACAGTGTTGATCCTTTACTTGTGCTCCCACACCAGAATGACAACACAAATAAGCCTATA
GGCCAAATAAAAATGGAAGAAGCTTTCCATCCTGCTGGAGAACCTGGATGCACATTTTCA
TCAAATTTGTGTCAGTCTTCCGCCGAGTCCTCTAAGAATGTCAAATTGGATTCGTATAAC
GGATACATAGGCGTTAATGAGATTCATGGATCACAGGTGCAAACAAATTTAAGCATTGCT
CTGTCTGCACCTTCATCGAACACAAAACTTTTTCCTGCTCCAGTGGATGAGAGGGACTTG
AACAAGAGAATTTCTTCCTTGCAACAAGGGTCTAGGTCTCGAAGCCTCTTGCCCAAACCC
CCCAAATCTACCTCTGCTGTGAGATCAGAGACAAATGCTGGCATACTTTCACAGATTCGT
GTTGCCAGGCCACCTGTTGAAGGTCGGATTAAGAATCAGTTGCTTCCACGTTATTGGCCG
AGGATAACAGATCAGGAGTTGCAGCAAATATCTGGAGACTCAAATTCCACCATCATACCA
TTATTTGAGAAGGTTCTGAGTGCAAGCGATGCAGGTCGAATTGGCCGTTTGGTACTTCCT
AAAGCATGTGCCGAAGCATATTTTCCACCAATTTCTCAACCAGAAGGCCTTCCTCTGCGG
ATTCAGGATGTGAAGGGCAAAGAATGGGTATTCCAGTTCAGATTTTGGCCAAACAACAAC
AGTAGAATGTATGTTCTCGAGGGTGTGACCCCTTGCATACAATCTATGCAATTACAAGCA
GGAGATACAGTAACTTTCAGTCGCATGGATCCAGAAGGAAAGCTTTTAATGGGGTTTCGT
AAAGCATCAACTGTTAATTCAACTCAGGAAACTCGTCTATCAGCCATACCGAAGAGTGTT
TTCTCCACTGAACCCACCTCTTTCTCAGCGATGCCTGATAATCTACCTTTAATGAGTGGT
TACTCTGGCCTTCTTCAGTCATTCAAAGGAAGCAGAGAGTCTTCTGTGAATTTGTCTTCT
AAGCATTTCAATAGTGGTGATTTTAGCTGGTACTTAACTGAGAAGAACGAAGGCAGGAAT
GCAGATGGCACATTCTCCCCTTCAATGCCTGTTTCAGACCGTAAAAGGAGTCGTAATATT
GGGTCAAAAAGTAAGAGACTGCTCATTGATTCCGATGAGGCTTTGGAGCTGAAACTTTCA
TGGGAAGAGTTACAGGATATGCTCCGACCACCGCTGAGTATTCAGCCGACCACTGTCACA
ATTGAGGACCACGAATTTGAAGAGTATGAACAACCACCTGTTCTTGGGAAGAGGAGCATA
TTTACTGTCCGCTCATCTGGGGAGCAGGAGCAGTGGGCTCAATGCGATAATTGCTTTAAG
TGGCGAAGGTTGCCAGCTGATTATCTTCTACCTCCTCAGTGGACATGTCAGGACAACATA
TTTGATCATAGCAGGTGCTCTTGTTCTGTCCCAGACGATTTAACACCCAGAGAGCTTGAA
TATCTTCTCAAAATGGACAAGGATTTAAAGAAACGGAGAAGTGCAGCAGGCCAAAGGGCA
ATGCATGCCCAAGATCCTTCTGACTTAGATTCTCAAGCAAATGGGACTGGTGTTGCTGGT
GACGTTAGAGAGCCTGGAGCCACATCAGTTGCAACCACAACAAAACATCCAAGGCATCGA
CCTGGCTGTTCTTGCATTGTGTGCATCCAGCCTCCCAGCGGGAAGGGCAAACATAATCCG
ACATGTACATGCAATGTCTGCTTAACAGTCAAACGCCGTTTCAAGACACTTATGATGCGT
AAAAAGAAGCGTCAATCAGAACGTGAAGCGGAAATTGGCCAGAGGAATCAACTTATGTGG
AGTTCAAAGGAAGAGACAGAAGTGGACAGCTTCTCTAGACAGGTGAAACCAGAAGCCGAT
CCTTCAGACAGAGAAAGATCAGGAAGCGAGACACTGGCGAGGGGCCATAGCAGCAATCAA
CTGCAGAAGCTTCCCGAAACCACAAGCAAGTCTTCCGCTAGAGACATATCTGAGGCAGAA
TGGTCTAACAAGCTTAGTTTCTGA

Peptide Sequence

PEP ID

XP_016435546.1
PEP Infomation

PREDICTED: B3 domain-containing transcription repressor VAL2-like isoform X2 [Nicotiana tabacum]
Sequence

MDSKICMNGVCGATSSIEWKKGWPLKSGEFACLCDKCGTAYEQLVFCDLFHSEDTGWREC
ISCGKRLHCGCIASSSLLELLDSGGINCVSCARSCQLHATPNHVKAKAFGTSNSNSVGET
PSTSLGSQMNGSEPNKREGSDSVDPLLVLPHQNDNTNKPIGQIKMEEAFHPAGEPGCTFS
SNLCQSSAESSKNVKLDSYNGYIGVNEIHGSQVQTNLSIALSAPSSNTKLFPAPVDERDL
NKRISSLQQGSRSRSLLPKPPKSTSAVRSETNAGILSQIRVARPPVEGRIKNQLLPRYWP
RITDQELQQISGDSNSTIIPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLR
IQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLLMGFR
KASTVNSTQETRLSAIPKSVFSTEPTSFSAMPDNLPLMSGYSGLLQSFKGSRESSVNLSS
KHFNSGDFSWYLTEKNEGRNADGTFSPSMPVSDRKRSRNIGSKSKRLLIDSDEALELKLS
WEELQDMLRPPLSIQPTTVTIEDHEFEEYEQPPVLGKRSIFTVRSSGEQEQWAQCDNCFK
WRRLPADYLLPPQWTCQDNIFDHSRCSCSVPDDLTPRELEYLLKMDKDLKKRRSAAGQRA
MHAQDPSDLDSQANGTGVAGDVREPGATSVATTTKHPRHRPGCSCIVCIQPPSGKGKHNP
TCTCNVCLTVKRRFKTLMMRKKKRQSEREAEIGQRNQLMWSSKEETEVDSFSRQVKPEAD
PSDRERSGSETLARGHSSNQLQKLPETTSKSSARDISEAEWSNKLSF

Transcript Sequence

Gene sequence data has not been registered.